Concept
flow cytometry
URI | http://vocab.nerc.ac.uk/collection/S04/current/S045/ | |
---|---|---|
Within Vocab | BODC parameter semantic model analytical method entity descriptions | |
Alternative Labels | FCM | |
Definition | Flow cytometry is the analysis of biological material by detection of the light-absorbing or fluorescing properties of cells or sub-cellular fractions such as chromosomes passing in a narrow stream through a laser beam. It is automated to sort successive droplets of the stream into different fractions depending on the fluorescence emitted by each droplet. | |
Date | 2018-01-11T16:20:49 | |
Identifier | SDN:S04::S045 | |
Note | accepted | |
Has Current Version | 2 | |
Version | 1 | |
version | 2 | |
Broader | S01:S0110 | analytical method entity |
Related | P01:C490A00Z | Biomass as carbon of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Subgroup: coccolithophores] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance |
P01:CYEUAFTX | Biomass as carbon of eukaryotic cells per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C419A00Z | Biomass as carbon of Coccolithus (ITIS: 2248: WoRMS 178598) per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:CYEUAFTA | Biomass as carbon of eukaryotic cells [Size: large] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C400A00B | Biomass as carbon of flagellates [Size: 4um] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C419A01A | Biomass as carbon of Coccolithus pelagicus (ITIS: 2249: WoRMS 178600) [Size: 6um] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C490A00A | Biomass as carbon of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Size: 5-8um Subgroup: coccolithophores] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:CYEUA00A | Biomass as carbon of picoeukaryotic cells per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:CU00A01A | Biomass as carbon of phytoplankton [Size: <11.5um] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C700A90Z | Biomass as carbon of Synechococcus (ITIS: 773: WoRMS 160572) per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:CYPKAFTX | Biomass as carbon of prokaryotic cells per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C490A00C | Biomass as carbon of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Size: small Subgroup: coccolithophores] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C400A00C | Biomass as carbon of flagellates [Size: 20um] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C200A00Z | Biomass as carbon of Dinoflagellates (ITIS: 9873: WoRMS 19542) per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:CYEUAFTB | Biomass as carbon of eukaryotic cells [Size: small] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C419A01B | Biomass as carbon of Coccolithus pelagicus (ITIS: 2249: WoRMS 178600) [Size: 2um] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:CU00A02Z | Biomass as carbon of picophytoplankton per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C400A00A | Biomass as carbon of flagellates [Size: 2um] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:HBBMAFTX | Biomass as carbon of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic] per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:C701A90Z | Biomass as carbon of Prochlorococcus (ITIS: 610076: WoRMS 345515) per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:CU00A01B | Biomass as carbon of nanophytoplankton per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:CU00A02A | Biomass as carbon of eukaryote picophytoplankton per unit volume of the water body by flow cytometry and computation of carbon biomass from abundance | |
P01:VIRU00V3 | Abundance of Virus [Subgroup: group V3] per unit volume of the water body by flow cytometry | |
P01:VIRUAFTA | Abundance of Virus [Size: large] per unit volume of the water body by flow cytometry | |
P01:VIRUFCAL | Abundance of Virus per unit volume of the water body by flow cytometry | |
P01:VIRUAFTB | Abundance of Virus [Size: small] per unit volume of the water body by flow cytometry | |
P01:VIRU00V1 | Abundance of Virus [Subgroup: group V1] per unit volume of the water body by flow cytometry | |
P01:VIRU00V2 | Abundance of Virus [Subgroup: group V2] per unit volume of the water body by flow cytometry | |
P01:VIRU00V4 | Abundance of Virus [Subgroup: group V4] per unit volume of the water body by flow cytometry | |
P01:HBCCAFSD | Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic] per unit volume of the water body by flow cytometry and subtraction of Synechococcus+Prochlorococcus from total bacteria | |
P01:P18318A9 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic; high nucleic acid cell content] per unit volume of the water body by flow cytometry | |
P01:PYPKAFTX | Abundance of prokaryotic cells per unit volume of the water body by flow cytometry | |
P01:BCPCAFZ4 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: Zubkov population 4] per unit volume of the water body by flow cytometry | |
P01:C804B6A6 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic; low nucleic acid cell content] per unit volume of the water body by flow cytometry | |
P01:P5B29926 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: low nucleic acid cell content] per unit volume of the water body by SYBR Green I staining and flow cytometry | |
P01:C804B6SD | Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic; low nucleic acid cell content] per unit volume of the water body by flow cytometry | |
P01:H396080A | Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by flow cytometry | |
P01:BCPCAFZ2 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: Zubkov population 2] per unit volume of the water body by flow cytometry | |
P01:PYPKAFB1 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: group PSB1 autotrophic] per unit volume of the water body by flow cytometry | |
P01:NA016999 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: high nucleic acid cell content] per unit volume of the water body by SYBR Green I staining and flow cytometry | |
P01:HBCCAFTX | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic] per unit volume of the water body by flow cytometry and subtraction of Synechococcus+Prochlorococcus from total bacteria | |
P01:TBCCAFTX | Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by flow cytometry | |
P01:P18318SD | Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic; high nucleic acid cell content] per unit volume of the water body by flow cytometry | |
P01:PYPKAFB2 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: group PSB2 autotrophic] per unit volume of the water body by flow cytometry | |
P01:BCPCAFZ1 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: Zubkov population 1] per unit volume of the water body by flow cytometry | |
P01:BACT00B2 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: group B2] per unit volume of the water body by flow cytometry | |
P01:BACT00B1 | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: group B1] per unit volume of the water body by flow cytometry | |
P01:NAN10059 | Abundance of nanoeukaryotic cells [Size: 3um Subgroup: plastidic] per unit volume of the water body by SYBR Green I staining and flow cytometry | |
P01:NAN10060 | Abundance of nanoeukaryotic cells [Size: 5um Subgroup: plastidic] per unit volume of the water body by SYBR Green I staining and flow cytometry | |
P01:NAN10058 | Abundance of nanoeukaryotic cells [Size: 2um Subgroup: plastidic] per unit volume of the water body by SYBR Green I staining and flow cytometry | |
P01:P490A00Z | Abundance of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Subgroup: coccolithophores] per unit volume of the water body by flow cytometry | |
P01:P419A01C | Abundance of Coccolithus pelagicus (ITIS: 2249: WoRMS 178600) [Size: 6um] per unit volume of the water body by flow cytometry | |
P01:J79A0596 | Abundance of Cryptophyceae (ITIS: 10598: WoRMS 17639) per unit volume of the water body by flow cytometry | |
P01:NA016EXP | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: high nucleic acid cell content] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry | |
P01:PU00A0SD | Abundance standard deviation of eukaryote picophytoplankton per unit volume of the water body by flow cytometry | |
P01:PYTTAFTX | Abundance of Cells per unit volume of the water body by flow cytometry | |
P01:CBCCAFTX | Abundance of Cyanobacteria (ITIS: 601: WoRMS 146537) per unit volume of the water body by flow cytometry | |
P01:P200A00Z | Abundance of Dinoflagellates (ITIS: 9873: WoRMS 19542) per unit volume of the water body by flow cytometry | |
P01:PYEUAFTB | Abundance of eukaryotic cells [Size: small] per unit volume of the water body by flow cytometry | |
P01:J79A05SD | Abundance standard deviation of Cryptophyceae (ITIS: 10598: WoRMS 17639) per unit volume of the water body by flow cytometry | |
P01:X726A86B | Abundance of nanoeukaryotic cells [Size: 2-12um] per unit volume of the water body by flow cytometry | |
P01:P701A90Z | Abundance of Prochlorococcus (ITIS: 610076: WoRMS 345515) per unit volume of the water body by flow cytometry | |
P01:P400A00B | Abundance of flagellates [Size: 4um] per unit volume of the water body by flow cytometry | |
P01:P419A01B | Abundance of Coccolithus pelagicus (ITIS: 2249: WoRMS 178600) [Size: 2um] per unit volume of the water body by flow cytometry | |
P01:HNANEXSD | Abundance standard deviation of nanoeukaryotic cells [Subgroup: heterotrophic] per unit volume of experiment water sample by flow cytometry | |
P01:PU00A02A | Abundance of eukaryote picophytoplankton per unit volume of the water body by flow cytometry | |
P01:PU00A02Z | Abundance of picophytoplankton per unit volume of the water body by flow cytometry | |
P01:PHYT00P7 | Abundance of picoeukaryotic cells [Subgroup: group P7] per unit volume of the water body by flow cytometry | |
P01:PHYT00P3 | Abundance of picoeukaryotic cells [Subgroup: group P3] per unit volume of the water body by flow cytometry | |
P01:P700A9SD | Abundance standard deviation of Synechococcus (ITIS: 773: WoRMS 160572) per unit volume of the water body by flow cytometry | |
P01:NAN02EXP | Abundance of eukaryotic cells [Size: 2-5um Subgroup: plastidic] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry | |
P01:P490A00A | Abundance of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Size: 5-8um Subgroup: coccolithophores] per unit volume of the water body by flow cytometry | |
P01:P700A90Z | Abundance of Synechococcus (ITIS: 773: WoRMS 160572) per unit volume of the water body by flow cytometry | |
P01:PHYTEXSD | Abundance standard deviation of eukaryote phytoplankton per unit volume of experiment water sample by flow cytometry | |
P01:PYEUAFTX | Abundance of eukaryotic cells per unit volume of the water body by flow cytometry | |
P01:HNANEXPF | Abundance of nanoeukaryotic cells [Subgroup: heterotrophic] per unit volume of experiment water sample by flow cytometry | |
P01:PYEUA0SD | Abundance standard deviation of picoeukaryotic cells per unit volume of the water body by flow cytometry | |
P01:ADI07845 | Abundance of Dinoflagellates (ITIS: 9873: WoRMS 19542) [Size: <20um Subgroup: autotrophic] per unit volume of the water body by flow cytometry | |
P01:U84B7203 | Abundance of eukaryotic cells [Subgroup: heterotrophic] per unit volume of the water body by SYBR Green I staining and flow cytometry | |
P01:TBCCSDXP | Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) per unit volume of experiment water sample by SYBR Green I staining and flow cytometry | |
P01:ANAXX01X | Abundance of nanoeukaryotic cells per unit volume of the water body by flow cytometry | |
P01:P700SDXP | Abundance standard deviation of Synechococcus (ITIS: 773: WoRMS 160572) per unit volume of experiment water sample by flow cytometry | |
P01:P5B2SDXP | Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: low nucleic acid cell content] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry | |
P01:PHYT00P8 | Abundance of picoeukaryotic cells [Subgroup: group P8] per unit volume of the water body by flow cytometry | |
P01:PYEUAFTA | Abundance of eukaryotic cells [Size: large] per unit volume of the water body by flow cytometry | |
P01:P5B29EXP | Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: low nucleic acid cell content] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry | |
P01:PU00A1SD | Abundance standard deviation of nanophytoplankton per unit volume of the water body by flow cytometry | |
P01:TBCCAEXP | Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of experiment water sample by SYBR Green I staining and flow cytometry | |
P01:PU00A01A | Abundance of phytoplankton [Size: <11.5um] per unit volume of the water body by flow cytometry | |
P01:ANPXX01X | Abundance of nanoprokaryotic cells per unit volume of the water body by flow cytometry | |
P01:ANA078SD | Abundance standard deviation of nanoeukaryotic cells [Subgroup: heterotrophic] per unit volume of the water body by flow cytometry | |
P01:APS04654 | Abundance of Pseudo-nitzschia delicatissima (ITIS: 584563: WoRMS 149153) per unit volume of the water body by flow cytometry | |
P01:PYEUA00A | Abundance of picoeukaryotic cells per unit volume of the water body by flow cytometry | |
P01:P419A01A | Abundance of Coccolithus pelagicus (ITIS: 2249: WoRMS 178600) [Size: 6um] per unit volume of the water body by flow cytometry | |
P01:APH078SD | Abundance standard deviation of Phaeocystis (ITIS: 2172: WoRMS 115088) [Size: 5-6um] per unit volume of the water body by flow cytometry | |
P01:PU00A01B | Abundance of nanophytoplankton per unit volume of the water body by flow cytometry | |
P01:P419A00Z | Abundance of Coccolithus (ITIS: 2248: WoRMS 178598) per unit volume of the water body by flow cytometry | |
P01:PHYTEXPF | Abundance of eukaryote phytoplankton per unit volume of experiment water sample by flow cytometry | |
P01:O32A8958 | Abundance of nanoeukaryotic cells [Size: 2-12um Subgroup: heterotrophic] per unit volume of the water body by SYBR Green I staining and flow cytometry | |
P01:NAN10057 | Abundance of nanoeukaryotic cells [Size: 5um Subgroup: aplastidic] per unit volume of the water body by SYBR Green I staining and flow cytometry | |
P01:P490S00Z | Abundance standard deviation of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Subgroup: coccolithophores] per unit volume of the water body by flow cytometry | |
P01:ANA07846 | Abundance of nanoeukaryotic cells [Subgroup: heterotrophic] per unit volume of the water body by flow cytometry | |
P01:E03B2919 | Abundance of Cyanobacteria (ITIS: 601: WoRMS 146537) [Size: 5-8um] per unit volume of the water body by flow cytometry | |
P01:PHYT00P5 | Abundance of picoeukaryotic cells [Subgroup: group P5] per unit volume of the water body by flow cytometry | |
P01:PHYT00P9 | Abundance of picoeukaryotic cells [Subgroup: group P9] per unit volume of the water body by flow cytometry | |
P01:P700AEXP | Abundance of Synechococcus (ITIS: 773: WoRMS 160572) per unit volume of experiment water sample by flow cytometry | |
P01:PHYT00P6 | Abundance of picoeukaryotic cells [Subgroup: group P6] per unit volume of the water body by flow cytometry | |
P01:PHYT00P2 | Abundance of picoeukaryotic cells [Subgroup: group P2] per unit volume of the water body by flow cytometry | |
P01:P400A00A | Abundance of flagellates [Size: 2um] per unit volume of the water body by flow cytometry | |
P01:P490A00C | Abundance of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Size: small Subgroup: coccolithophores] per unit volume of the water body by flow cytometry | |
P01:PHYT00P4 | Abundance of picoeukaryotic cells [Subgroup: group P4] per unit volume of the water body by flow cytometry | |
P01:ADI047SD | Abundance standard deviation of Dinoflagellates (ITIS: 9873: WoRMS 19542) [Subgroup: autotrophic] per unit volume of the water body by flow cytometry | |
P01:P400A00C | Abundance of flagellates [Size: 20um] per unit volume of the water body by flow cytometry | |
P01:P490A0SD | Abundance standard deviation of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Size: 5-8um Subgroup: coccolithophores] per unit volume of the water body by flow cytometry | |
P01:APH07844 | Abundance of Phaeocystis (ITIS: 2172: WoRMS 115088) [Size: 5-6um] per unit volume of the water body by flow cytometry | |
P01:PHYT0P10 | Abundance of picoeukaryotic cells [Subgroup: group P10] per unit volume of the water body by flow cytometry | |
P01:ANA07969 | Abundance of nanoeukaryotic cells [Subgroup: autotrophic] per unit volume of the water body by flow cytometry | |
P01:NAN01EXP | Abundance of eukaryotic cells [Size: 2-5um Subgroup: aplastidic] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry | |
P01:PHYT00P1 | Abundance of picoeukaryotic cells [Subgroup: group P1] per unit volume of the water body by flow cytometry | |
P01:NA01SDXP | Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: high nucleic acid cell content] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry | |
P01:PHYTFCAL | Abundance of phytoplankton per unit volume of the water body by flow cytometry | |
P01:APS046SD | Abundance standard deviation of Pseudo-nitzschia delicatissima (ITIS: 584563: WoRMS 149153) per unit volume of the water body by flow cytometry | |
P01:P701A9SD | Abundance standard deviation of Prochlorococcus (ITIS: 610076: WoRMS 345515) per unit volume of the water body by flow cytometry | |
P01:FLOARESD | Area standard deviation of orange fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FWSMAXAA | Peak height mean of forward light scatter pulse per cluster from the water body by flow cytometry | |
P01:FLOMAXAA | Peak height mean of orange fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FLRMAXAA | Peak height mean of red fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FLOAREAA | Area mean of orange fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FWSMAXSD | Peak height standard deviation of forward light scatter pulse per cluster from the water body by flow cytometry | |
P01:SWSMAXSD | Peak height standard deviation of sideward light scatter pulse per cluster from the water body by flow cytometry | |
P01:FLYAREAA | Area mean of yellow fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FWSARESD | Area standard deviation of forward light scatter pulse per cluster from the water body by flow cytometry | |
P01:FWSAREAM | Area median of forward light scatter pulse per cluster from the water body by flow cytometry | |
P01:FLOMAXSD | Peak height standard deviation of orange fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FLRMAXSD | Peak height standard deviation of red fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FLRAREAM | Area median of red fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FLOAREAM | Area median of orange fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FLGAREAA | Area mean of green fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FLGARESD | Area standard deviation of green fluorescence pulse per cluster from the water body by flow cytometry | |
P01:SWSAREAA | Area mean of sideward light scatter pulse per cluster from the water body by flow cytometry | |
P01:FLYMAXSD | Peak height standard deviation of yellow fluorescence pulse per cluster from the water body by flow cytometry | |
P01:SWSARESD | Area standard deviation of sideward light scatter pulse per cluster from the water body by flow cytometry | |
P01:FLYARESD | Area standard deviation of yellow fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FLGMAXAA | Peak height mean of green fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FLYMAXAA | Peak height mean of yellow fluorescence pulse per cluster from the water body by flow cytometry | |
P01:FLRARESD | Area standard deviation of red fluorescence pulse per cluster from the water body by flow cytometry | |
P01:SWSMAXAA | Peak height mean of sideward light scatter pulse per cluster from the water body by flow cytometry | |
P01:FLRAREAA | Area mean of red fluorescence pulse per cluster from the water body by flow cytometry | |
P01:SWSAREAM | Area median of sideward light scatter pulse per cluster from the water body by flow cytometry | |
P01:FWSAREAA | Area mean of forward light scatter pulse per cluster from the water body by flow cytometry | |
P01:FLGMAXSD | Peak height standard deviation of green fluorescence pulse per cluster from the water body by flow cytometry |
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