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Concept

flow cytometry

URI	http://vocab.nerc.ac.uk/collection/S04/current/S045/
Within Vocab	BODC parameter semantic model analytical method entity descriptions
Preferred Label	flow cytometry
Definition	Flow cytometry is the analysis of biological material by detection of the light-absorbing or fluorescing properties of cells or sub-cellular fractions such as chromosomes passing in a narrow stream through a laser beam. It is automated to sort successive droplets of the stream into different fractions depending on the fluorescence emitted by each droplet.
Broader	S01: analytical method entity
Related	P01: Abundance standard deviation of Dinoflagellates (ITIS: 9873: WoRMS 19542) [Subgroup: autotrophic] per unit volume of the water body by flow cytometry P01: Abundance of Dinoflagellates (ITIS: 9873: WoRMS 19542) [Size: <20um Subgroup: autotrophic] per unit volume of the water body by flow cytometry P01: Abundance of nanoeukaryotic cells [Subgroup: heterotrophic] per unit volume of the water body by flow cytometry P01: Abundance standard deviation of nanoeukaryotic cells [Subgroup: heterotrophic] per unit volume of the water body by flow cytometry P01: Abundance of nanoeukaryotic cells [Subgroup: autotrophic] per unit volume of the water body by flow cytometry P01: Abundance of nanoeukaryotic cells per unit volume of the water body by flow cytometry P01: Abundance of nanoprokaryotic cells per unit volume of the water body by flow cytometry P01: Abundance of Phaeocystis (ITIS: 2172: WoRMS 115088) [Size: 5-6um] per unit volume of the water body by flow cytometry P01: Abundance standard deviation of Phaeocystis (ITIS: 2172: WoRMS 115088) [Size: 5-6um] per unit volume of the water body by flow cytometry P01: Abundance of Pseudo-nitzschia delicatissima (ITIS: 584563: WoRMS 149153) per unit volume of the water body by flow cytometry P01: Abundance standard deviation of Pseudo-nitzschia delicatissima (ITIS: 584563: WoRMS 149153) per unit volume of the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: group B1] per unit volume of the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: group B2] per unit volume of the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: Zubkov population 1] per unit volume of the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: Zubkov population 2] per unit volume of the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: Zubkov population 4] per unit volume of the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic; low nucleic acid cell content] per unit volume of the water body by flow cytometry P01: Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic; low nucleic acid cell content] per unit volume of the water body by flow cytometry P01: Abundance of Cyanobacteria (ITIS: 601: WoRMS 146537) per unit volume of the water body by flow cytometry P01: Abundance of Cyanobacteria (ITIS: 601: WoRMS 146537) [Size: 5-8um] per unit volume of the water body by flow cytometry P01: Area mean of green fluorescence pulse per cluster from the water body by flow cytometry P01: Area standard deviation of green fluorescence pulse per cluster from the water body by flow cytometry P01: Peak height mean of green fluorescence pulse per cluster from the water body by flow cytometry P01: Peak height standard deviation of green fluorescence pulse per cluster from the water body by flow cytometry P01: Area mean of orange fluorescence pulse per cluster from the water body by flow cytometry P01: Area median of orange fluorescence pulse per cluster from the water body by flow cytometry P01: Area standard deviation of orange fluorescence pulse per cluster from the water body by flow cytometry P01: Peak height mean of orange fluorescence pulse per cluster from the water body by flow cytometry P01: Peak height standard deviation of orange fluorescence pulse per cluster from the water body by flow cytometry P01: Area mean of red fluorescence pulse per cluster from the water body by flow cytometry P01: Area median of red fluorescence pulse per cluster from the water body by flow cytometry P01: Area standard deviation of red fluorescence pulse per cluster from the water body by flow cytometry P01: Peak height mean of red fluorescence pulse per cluster from the water body by flow cytometry P01: Peak height standard deviation of red fluorescence pulse per cluster from the water body by flow cytometry P01: Area mean of yellow fluorescence pulse per cluster from the water body by flow cytometry P01: Area standard deviation of yellow fluorescence pulse per cluster from the water body by flow cytometry P01: Peak height mean of yellow fluorescence pulse per cluster from the water body by flow cytometry P01: Peak height standard deviation of yellow fluorescence pulse per cluster from the water body by flow cytometry P01: Area mean of forward light scatter pulse per cluster from the water body by flow cytometry P01: Area median of forward light scatter pulse per cluster from the water body by flow cytometry P01: Area standard deviation of forward light scatter pulse per cluster from the water body by flow cytometry P01: Peak height mean of forward light scatter pulse per cluster from the water body by flow cytometry P01: Peak height standard deviation of forward light scatter pulse per cluster from the water body by flow cytometry P01: Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by flow cytometry P01: Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic] per unit volume of the water body by flow cytometry and subtraction of Synechococcus+Prochlorococcus from total bacteria P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic] per unit volume of the water body by flow cytometry and subtraction of Synechococcus+Prochlorococcus from total bacteria P01: Abundance of nanoeukaryotic cells [Subgroup: heterotrophic] per unit volume of experiment water sample by flow cytometry P01: Abundance standard deviation of nanoeukaryotic cells [Subgroup: heterotrophic] per unit volume of experiment water sample by flow cytometry P01: Abundance of Cryptophyceae (ITIS: 10598: WoRMS 17639) per unit volume of the water body by flow cytometry P01: Abundance standard deviation of Cryptophyceae (ITIS: 10598: WoRMS 17639) per unit volume of the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: high nucleic acid cell content] per unit volume of the water body by SYBR Green I staining and flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: high nucleic acid cell content] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry P01: Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: high nucleic acid cell content] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry P01: Abundance of eukaryotic cells [Size: 2-5um Subgroup: aplastidic] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry P01: Abundance of eukaryotic cells [Size: 2-5um Subgroup: plastidic] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry P01: Abundance of nanoeukaryotic cells [Size: 5um Subgroup: aplastidic] per unit volume of the water body by SYBR Green I staining and flow cytometry P01: Abundance of nanoeukaryotic cells [Size: 2um Subgroup: plastidic] per unit volume of the water body by SYBR Green I staining and flow cytometry P01: Abundance of nanoeukaryotic cells [Size: 3um Subgroup: plastidic] per unit volume of the water body by SYBR Green I staining and flow cytometry P01: Abundance of nanoeukaryotic cells [Size: 5um Subgroup: plastidic] per unit volume of the water body by SYBR Green I staining and flow cytometry P01: Abundance of nanoeukaryotic cells [Size: 2-12um Subgroup: heterotrophic] per unit volume of the water body by SYBR Green I staining and flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic; high nucleic acid cell content] per unit volume of the water body by flow cytometry P01: Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: heterotrophic; high nucleic acid cell content] per unit volume of the water body by flow cytometry P01: Abundance of Dinoflagellates (ITIS: 9873: WoRMS 19542) per unit volume of the water body by flow cytometry P01: Abundance of flagellates [Size: 2um] per unit volume of the water body by flow cytometry P01: Abundance of flagellates [Size: 4um] per unit volume of the water body by flow cytometry P01: Abundance of flagellates [Size: 20um] per unit volume of the water body by flow cytometry P01: Abundance of Coccolithus (ITIS: 2248: WoRMS 178598) per unit volume of the water body by flow cytometry P01: Abundance of Coccolithus pelagicus (ITIS: 2249: WoRMS 178600) [Size: 2um] per unit volume of the water body by flow cytometry P01: Abundance of Coccolithus pelagicus (ITIS: 2249: WoRMS 178600) [Size: 6um] per unit volume of the water body by flow cytometry P01: Abundance of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Size: 5-8um Subgroup: coccolithophores] per unit volume of the water body by flow cytometry P01: Abundance of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Size: small Subgroup: coccolithophores] per unit volume of the water body by flow cytometry P01: Abundance of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Subgroup: coccolithophores] per unit volume of the water body by flow cytometry P01: Abundance standard deviation of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Size: 5-8um Subgroup: coccolithophores] per unit volume of the water body by flow cytometry P01: Abundance standard deviation of Prymnesiophyceae (ITIS: 2135: WoRMS 115057) [Subgroup: coccolithophores] per unit volume of the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: low nucleic acid cell content] per unit volume of the water body by SYBR Green I staining and flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: low nucleic acid cell content] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry P01: Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: low nucleic acid cell content] per unit volume of experiment water sample by SYBR Green I staining and flow cytometry P01: Abundance of Synechococcus (ITIS: 773: WoRMS 160572) per unit volume of the water body by flow cytometry P01: Abundance standard deviation of Synechococcus (ITIS: 773: WoRMS 160572) per unit volume of the water body by flow cytometry P01: Abundance of Synechococcus (ITIS: 773: WoRMS 160572) per unit volume of experiment water sample by flow cytometry P01: Abundance standard deviation of Synechococcus (ITIS: 773: WoRMS 160572) per unit volume of experiment water sample by flow cytometry P01: Abundance of Prochlorococcus (ITIS: 610076: WoRMS 345515) per unit volume of the water body by flow cytometry P01: Abundance standard deviation of Prochlorococcus (ITIS: 610076: WoRMS 345515) per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells [Subgroup: group P1] per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells [Subgroup: group P2] per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells [Subgroup: group P3] per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells [Subgroup: group P4] per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells [Subgroup: group P5] per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells [Subgroup: group P6] per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells [Subgroup: group P7] per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells [Subgroup: group P8] per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells [Subgroup: group P9] per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells [Subgroup: group P10] per unit volume of the water body by flow cytometry P01: Abundance of eukaryote phytoplankton per unit volume of experiment water sample by flow cytometry P01: Abundance standard deviation of eukaryote phytoplankton per unit volume of experiment water sample by flow cytometry P01: Abundance of phytoplankton per unit volume of the water body by flow cytometry P01: Abundance of phytoplankton [Size: <11.5um] per unit volume of the water body by flow cytometry P01: Abundance of nanophytoplankton per unit volume of the water body by flow cytometry P01: Abundance of eukaryote picophytoplankton per unit volume of the water body by flow cytometry P01: Abundance of picophytoplankton per unit volume of the water body by flow cytometry P01: Abundance standard deviation of eukaryote picophytoplankton per unit volume of the water body by flow cytometry P01: Abundance standard deviation of nanophytoplankton per unit volume of the water body by flow cytometry P01: Abundance of picoeukaryotic cells per unit volume of the water body by flow cytometry P01: Abundance standard deviation of picoeukaryotic cells per unit volume of the water body by flow cytometry P01: Abundance of eukaryotic cells [Size: large] per unit volume of the water body by flow cytometry P01: Abundance of eukaryotic cells [Size: small] per unit volume of the water body by flow cytometry P01: Abundance of eukaryotic cells per unit volume of the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: group PSB1 autotrophic] per unit volume of the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) [Subgroup: group PSB2 autotrophic] per unit volume of the water body by flow cytometry P01: Abundance of prokaryotic cells per unit volume of the water body by flow cytometry P01: Abundance of Cells per unit volume of the water body by flow cytometry P01: Area mean of sideward light scatter pulse per cluster from the water body by flow cytometry P01: Area median of sideward light scatter pulse per cluster from the water body by flow cytometry P01: Area standard deviation of sideward light scatter pulse per cluster from the water body by flow cytometry P01: Peak height mean of sideward light scatter pulse per cluster from the water body by flow cytometry P01: Peak height standard deviation of sideward light scatter pulse per cluster from the water body by flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of experiment water sample by SYBR Green I staining and flow cytometry P01: Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by flow cytometry P01: Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) per unit volume of experiment water sample by SYBR Green I staining and flow cytometry P01: Abundance of eukaryotic cells [Subgroup: heterotrophic] per unit volume of the water body by SYBR Green I staining and flow cytometry P01: Abundance of Virus [Subgroup: group V1] per unit volume of the water body by flow cytometry P01: Abundance of Virus [Subgroup: group V2] per unit volume of the water body by flow cytometry P01: Abundance of Virus [Subgroup: group V3] per unit volume of the water body by flow cytometry P01: Abundance of Virus [Subgroup: group V4] per unit volume of the water body by flow cytometry P01: Abundance of Virus [Size: large] per unit volume of the water body by flow cytometry P01: Abundance of Virus [Size: small] per unit volume of the water body by flow cytometry P01: Abundance of Virus per unit volume of the water body by flow cytometry P01: Abundance of nanoeukaryotic cells [Size: 2-12um] per unit volume of the water body by flow cytometry
Note	accepted
Deprecated	false
Alternative Label	FCM
Version	2
Has Current Version	http://vocab.nerc.ac.uk/collection/S04/current/S045/2/
Authored On	2018-01-11 16:20:49

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