| URI |
http://vocab.nerc.ac.uk/collection/S25/current/BE000540/ |
| Within Vocab |
BODC parameter semantic model biological entity names |
| Alternative Labels |
|
| Definition |
|
| Date |
2019-01-21T14:18:34 |
| Identifier |
SDN:S25::BE000540 |
| Note |
accepted |
| Has Current Version |
2 |
| Version |
1
|
| version |
2 |
|
Same As
|
LSID
|
http://lsid.tdwg.org/urn:lsid:marinespecies.org:taxname:6 | Mapping: 165250 |
|
|
WoRMS
|
http://www.marinespecies.org/aphia.php?p=taxdetails&id=6 | Mapping: 87298 |
|
Broader
|
S01:S015 |
biological entity |
Mapping: 1456308 |
|
Narrower
|
|
| P01:TBCCAEXP |
Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of experiment water sample by SYBR Green I staining and flow cytometry |
Mapping: 1255379 |
|
| P01:TBCCSVOL |
Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the sediment |
Mapping: 1235225 |
|
| P01:TBCCXXXX |
Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body |
Mapping: 1235217 |
|
| P01:TBCCMAPZ |
Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by acridine orange staining and microscopy |
Mapping: 1210333 |
|
| P01:TBCCMDPZ |
Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by DAPI staining and microscopy |
Mapping: 1211425 |
|
| P01:TBCCAFTX |
Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by flow cytometry |
Mapping: 1209791 |
|
| P01:TBCCMIPZ |
Abundance of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by unspecified staining and microscopy |
Mapping: 1211463 |
|
| P01:ATCXTBX1 |
Abundance of bacteria (ITIS: 202421: WoRMS 6) {total bacteria count} per unit dry weight of sediment by colony-forming units assay |
Mapping: 1579982 |
|
| P01:ATCXTBW1 |
Abundance of bacteria (ITIS: 202421: WoRMS 6) {total bacteria count} per unit volume of the water body by colony-forming units assay |
Mapping: 1580302 |
|
| P01:TBCCSDXP |
Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) per unit volume of experiment water sample by SYBR Green I staining and flow cytometry |
Mapping: 1237975 |
|
| P01:SDTBMDPZ |
Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by DAPI staining and microscopy |
Mapping: 1210347 |
|
| P01:H396080A |
Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by flow cytometry |
Mapping: 1235141 |
|
| P01:SDTBMIPZ |
Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by unspecified staining and microscopy |
Mapping: 1211439 |
|
| P01:ATCXTBSD |
Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) {total bacteria count} per unit dry weight of sediment by colony-forming units assay |
Mapping: 1579998 |
|
| P01:ATCXTBW2 |
Abundance standard deviation of bacteria (ITIS: 202421: WoRMS 6) {total bacteria count} per unit volume of the water body by colony-forming units assay |
Mapping: 1580318 |
|
| P01:TBBMXXXX |
Biomass as carbon of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body |
Mapping: 1656325 |
|
| P01:TBBMMAPZ |
Biomass as carbon of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by acridine orange staining and epifluorescence microscopy and computation of carbon biomass from abundance |
Mapping: 1629813 |
|
| P01:TBBMMDPZ |
Biomass as carbon of bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by DAPI staining and optical microscopy and computation of carbon biomass from abundance |
Mapping: 1631687 |
|
| P01:BPRDCVXX |
Carbon production rate of Bacteria (ITIS: 202421: WoRMS 6) per unit time per unit volume of the water body by computation as carbon from amino acid uptake, abundance and cell volume data |
Mapping: 331205 |
|
| P01:TBGZMAPA |
Grazing turnover rate (hourly) of Bacteria (ITIS: 202421: WoRMS 6) per unit time in the water body by parallel incubations with and without grazers, acridine orange staining and epifluorescence microscopy and processing after Wright and Coffin (1984) |
Mapping: 336131 |
|
| P01:GREFIEBC |
Growth efficiency of bacteria (ITIS: 202421: WoRMS 6) in the water body [particulate <0.8um phase] by filtration, incubation |
Mapping: 1433710 |
|
| P01:TBMSIAPZ |
Median size of Bacteria (ITIS: 202421: WoRMS 6) by acridine orange staining and image analysis |
Mapping: 330855 |
|
| P01:TBMVIDPZ |
Median volume of Bacteria (ITIS: 202421: WoRMS 6) by DAPI staining and image analysis |
Mapping: 338826 |
|
| P01:BATTMAPZ |
Proportion of bacteria (ITIS: 202421: WoRMS 6) attached to the suspended particulate material by acridine orange staining and epifluorescence microscopy |
Mapping: 1430286 |
|
| P01:TBBPAFPZ |
Protein biomass of Bacteria (ITIS: 202421: WoRMS 6) per unit volume of the water body by automated flow cytometry and protein fluorescence |
Mapping: 330492 |
|
| P01:B75A49A5 |
Relative abundance of amplifiable DNA sequences (95 percent confidence interval) of Bacteria (ITIS: 202421: WoRMS 6) in the water body by polymerase chain reaction with universal primer; serial dilution and relative UV fluorescence product assay and most probable number analysis |
Mapping: 337252 |
|
| P01:O36B7282 |
Relative abundance of amplifiable DNA sequences of Bacteria (ITIS: 202421: WoRMS 6) in the water body by polymerase chain reaction with universal primer; serial dilution and relative UV fluorescence product assay and most probable number analysis |
Mapping: 341032 |
|
| P01:RHDAPI34 |
Relative hybridisation with Alphaproteobacteria probe (ALF968) of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334756 |
|
| P01:RHDAPI43 |
Relative hybridisation with Alphaproteobacteria probe (ALF968) standard deviation of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334780 |
|
| P01:RHDAPI37 |
Relative hybridisation with Bacteroidetes probe (CF319A) of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334758 |
|
| P01:RHDAPI46 |
Relative hybridisation with Bacteroidetes probe (CF319A) standard deviation of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334782 |
|
| P01:RHDAPI33 |
Relative hybridisation with Eubacteria probe (EUBI-III) of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334967 |
|
| P01:RHDAPI42 |
Relative hybridisation with Eubacteria probe (EUBI-III) standard deviation of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334779 |
|
| P01:RHDAPI36 |
Relative hybridisation with Gammaproteobacteria probe (GAM42a) of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 338631 |
|
| P01:RHDAPI45 |
Relative hybridisation with Gammaproteobacteria probe (GAM42a) standard deviation of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334781 |
|
| P01:RHDAPI40 |
Relative hybridisation with Prochlorococcus high-light adapted ecotype I probe (645HLI) of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334760 |
|
| P01:RHDAPI49 |
Relative hybridisation with Prochlorococcus high-light adapted ecotype I probe (645HLI) standard deviation of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 341102 |
|
| P01:RHDAPI41 |
Relative hybridisation with Prochlorococcus high-light adapted ecotype II probe (645HLII) of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 338640 |
|
| P01:RHDAPI50 |
Relative hybridisation with Prochlorococcus high-light adapted ecotype II probe (645HLII) standard deviation of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334799 |
|
| P01:RHDAPI39 |
Relative hybridisation with Prochlorococcus probe (405PRO) of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 338632 |
|
| P01:RHDAPI48 |
Relative hybridisation with Prochlorococcus probe (405PRO) standard deviation of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 337368 |
|
| P01:RHDAPI35 |
Relative hybridisation with SAR11 Clade probe (SAR11-441R) of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334757 |
|
| P01:RHDAPI44 |
Relative hybridisation with SAR11 Clade probe (SAR11-441R) standard deviation of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 338641 |
|
| P01:RHDAPI38 |
Relative hybridisation with Synechococcus probe (405SYN) of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 334759 |
|
| P01:RHDAPI47 |
Relative hybridisation with Synechococcus probe (405SYN) standard deviation of Bacteria (ITIS: 202421: WoRMS 6) by preservation, filtration and CARD-FISH with DAPI staining and epifluorescence microscopy and expressed as a proportion of DAPI-stained cells |
Mapping: 338642 |
